Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX469557: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320273' containing sample 'DAR1310'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 864.2M bases, 393.1Mb downloads

UUID: 5bcd05fb-3c94-40cb-b30f-090d9f06f670

Design: Illumina sequencing of Staphylococcus aureus DAR1310 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA USA100

PRJNA228316 • SRP037640 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DAR1310

SAMN02403782 • SRS556803 • All experiments • All runs

Organism: Staphylococcus aureus DAR1310

Library:

Name: Pond-320273

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 475184.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5DHJP

material_type: DNA:DNA Somatic

product_order: PDO-2554

product_part_number: P-MCV-0001

project: G54882

research_project: RP-506

root_sample_id: SM-4P9DF

sample_id: SM-5DHJP

work_request: 40067

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 864.2M bases, 393.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1167819	2,072,886	418.7M	190.2Mb	2014-02-11
SRR1172506	2,205,400	445.5M	202.9Mb	2014-02-19

ID:: 649745

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